Software Development AI agent skills

13,359 skills in the archive. Read a skill’s instructions or open its original repository.

• Ontology Term Resolution

  by @K-Dense-AI

  Resolves free-text scientific labels to ontology term IDs and validates existing CURIEs against the EBI Ontology Lookup Service (OLS4). Also looks up prefixes in Bioregistry, resolves compact identifiers via Identifiers.org,…

• Latchbio Integration

  by @K-Dense-AI

  Builds, registers, debugs, and operates bioinformatics workflows on Latch using the Python SDK, CLI, Latch Data and Registry, Nextflow, Snakemake, programmatic execution, and Latch MCP. Use when authoring or deploying Latch…

• Fictiv

  by @K-Dense-AI

  Operates Fictiv (app.fictiv.com), the on-demand manufacturing platform, end to end in the user's browser. Covers uploading CAD parts, configuring process, material, finish, threads, tolerances and inspections, getting instant or…

• Nextflow

  by @K-Dense-AI

  Builds, runs, and debugs Nextflow DSL2 pipelines and nf-core workflows. Use for Nextflow, nf-core, .nf files, nextflow.config, processes/channels/operators, samplesheets, nf-test, modules/subworkflows, container and executor…

• Matchms

  by @K-Dense-AI

  Processes, cleans, compares, and searches tandem mass spectra with matchms. Use for MS/MS file I/O, metadata harmonization, peak filtering, spectral similarity, library matching, score matrices, and molecular-similarity…

• Labarchive Integration

  by @K-Dense-AI

  Integrates with the official LabArchives ELN REST-like API and Inventory API v1. Supports regional endpoint selection, signed-request construction, user authorization and UID flows, local LA container validation, and verified…

• Paperclip

  by @K-Dense-AI

  Searches and reads biomedical papers, FDA/PMDA/EMA documents, clinical trials, and protein records with the GXL Paperclip CLI and Python SDK. Supports source-scoped search, full-text grep, metadata SQL, map/reduce extraction,…

• Liteparse

  by @K-Dense-AI

  Local document and PDF parsing that returns spatial text with bounding boxes. Use for extracting text from PDFs, DOCX, Office files, and images; running OCR on scans; producing layout-preserved JSON for RAG; batch-ingesting…

• Matplotlib

  by @K-Dense-AI

  Creates and customizes scientific plots with Matplotlib. Used for fine-grained control over plot elements, novel plot types, and scientific workflows. Export to PNG/PDF/SVG for publication. For quick statistical plots use…

• Onekgpd

  by @K-Dense-AI

  Queries the 1000 Genomes Project dataset (3,202 whole-genome-sequenced individuals, GRCh38) at the level of individual participants. Use when a question is about individuals or variants in the 1000 Genomes Project cohort: which…

• Pacsomatic

  by @K-Dense-AI

  Prepares and launches nf-core/pacsomatic matched tumor-normal PacBio HiFi genomics workflows from unaligned BAM inputs. Supports samplesheet generation, pinned Nextflow launch artifacts, local checks, LSF/Slurm/PBS Pro/SGE…

• Openpiv

  by @K-Dense-AI

  Performs Particle Image Velocimetry (PIV) analysis with OpenPIV. Use when extracting velocity fields from PIV image pairs, analyzing fluid dynamics or flow visualization experiments, cross-correlating interrogation windows,…

• Marine Carbonate Chemistry

  by @K-Dense-AI

  Solves seawater carbonate chemistry with PyCO2SYS for chemical oceanography, ocean acidification, and marine carbon-cycle research. Use for paired total alkalinity, dissolved inorganic carbon, pH, or seawater pCO2/fCO2…

• Flowkit

  by @K-Dense-AI

  Analyzes flow cytometry data with FlowKit, including spillover compensation, logicle and biexponential transforms, hierarchical gating, GatingML strategies, and supported FlowJo 10 workspaces. Use for reproducible gate counts,…

• Cantera

  by @K-Dense-AI

  Runs Cantera homogeneous chemical reactors and evaluates ignition delay with mechanism provenance, conservation checks, and numerical refinement. Use for combustion kinetics, closed adiabatic ideal-gas constant-volume or…

• Nmrglue

  by @K-Dense-AI

  Processes calibrated one-dimensional complex NMR free-induction decays with nmrglue into phased spectra, peak candidates, and signed integration regions. Use for raw 1D NMR processing, ppm-axis verification, apodization, Fourier…

• Cellprofiler

  by @K-Dense-AI

  Runs reproducible CellProfiler microscopy pipelines for nuclear segmentation, cell counts, and per-object fluorescence measurements. Supports image/channel manifests, headless batch execution, segmentation overlays, and…

• Medchem

  by @K-Dense-AI

  Applies medicinal chemistry filters for compound triage, using drug-likeness rules (Lipinski, Veber, CNS), structural alert catalogs (PAINS, NIBR, ChEMBL), complexity metrics, and the medchem query language for library filtering.

• Molecular Dynamics

  by @K-Dense-AI

  Runs and analyzes molecular dynamics simulations with OpenMM and MDAnalysis. Sets up protein/small molecule systems, defines force fields, runs energy minimization and production MD, and analyzes trajectories (RMSD, RMSF,…

• Prisma 8

  by @prisma

  Use when working in a project that depends on @prisma/orm-postgres, @prisma/orm-sqlite, or @prisma/orm-mongo (Prisma 8, formerly Prisma Next): editing contract.prisma or a contract.ts builder, running `prisma contract emit`,…

• Review Fetch Phase

  by @prisma

  Fetches canonical PR review state and renders derived state artifacts. Use when the user wants the state acquisition phase only (fetch, render, summarize) for a review-framework PR.

• Review Implement Phase

  by @prisma

  Implements triaged review actions, commits focused fixes, and posts Done plus resolves threads. Use when the user wants only the implementation phase of the review-framework workflow.

• Github Review Iteration

  by @prisma

  Orchestrates a GitHub PR review loop by delegating triage and implementation to dedicated sub-agents, then repeating until actionable review items are cleared. Use when the user says “address PR review”, “triage review…

• Record Gotchas

  by @prisma

  Capture surprises, workarounds, and rough edges hit while *consuming* the public surface of Prisma 8, Prisma Compute, or Prisma Postgres — anything a real user of these products would experience. Fires whenever an operator (or…

• Publish Npm Version

  by @prisma

  Cuts the next release of Prisma 8: bumps the root package.json version (on the v8 RC line: 8.0.0-rc.N → rc.N+1), propagates it to every workspace package, and opens a PR titled "chore(release): bump to <next-version>". When the…

• Draft Release Notes

  by @prisma

  Author the committed release-notes file for a Prisma 8 release (stable or `8.0.0-rc.N`) by enumerating the merged PRs since the previous release `v*` tag (stable or `-rc.N`), resolving opaque `TML-NNNN:` titles via Linear…

• Record Upgrade Instructions

  by @prisma

  Record upgrade instructions alongside a Prisma 8 breaking-change PR, so downstream consumers (users of `@internal/*` and authors of Prisma 8 extensions) can apply the matching code translation automatically via the published…

• Triage Contributor Pr

  by @prisma

  Triage open pull requests from external contributors to prisma/prisma and produce a per-PR verdict with evidence. Use when a maintainer asks to triage, evaluate, assess, or review the queue of incoming contributor PRs, to decide…

• Markdown No Artificial Line Wraps

  by @prisma

  Writes and edits Markdown without inserting manual hard line breaks at a fixed column (e.g. 72 or 80). GitHub, docs sites, and editors soft-wrap prose; artificial breaks make diffs noisy and reflow awkward. Use when creating or…

• Bumping Biome

  by @prisma

  Bumps `biome` package versions (e.g. `@biomejs/biome`) using `pnpm`, aligns `biome.jsonc` files with the new version/s across the repository and runs biome-related checks. Use when required to update `biome` to a newer version -…

• Contrib Pr

  by @prisma

  Open a high-quality external contributor PR against prisma/orm. Use when the user is an outside contributor (not a Prisma maintainer) and wants to submit a change as a pull request from a fork. Encodes the contribution flow from…

• Ast Visitor Pattern

  by @prisma

  Use the frozen-class/visitor pattern for discriminated unions that have multiple dispatch sites. Use when creating a new set of variants (commands, IR nodes, factory calls) that will be switched over in 2+ places, or when…

• Adr Review

  by @prisma

  Review one or more ADRs with fresh eyes (as a team member without prior context), identify narrative and structural issues, then rewrite them. Use when the user asks to review, improve, rewrite, or take a fresh-eyes pass on an…

• Create Pr

  by @prisma

  Creates a GitHub PR with a Linear-ticket-prefixed title and a decision-led, narrative description for Prisma 8. Use when the user wants to create a pull request, open a PR, or submit changes for review.

• No Bare Casts

  by @prisma

  Writing `as` in TypeScript or TSX production code, modifying a file that contains a bare `as` cast, silencing a type error with a cast, encountering `as unknown as`, or reviewing a cast site.

• Multiline Commit Messages

  by @prisma

  Use single-quoted strings for multiline git commit messages in the Shell tool. Prevents heredoc escaping failures that produce garbled commit messages.

• Agent Reels

  by @sickn33

  Find animation and video references on 1human, consult a human-agent shared library, and contribute public creations only with prior owner permission.

• Ai Agent Evaluation Benchmarking

  by @sickn33

  Autonomous AI agent benchmark evaluation register: task completion rates, planning accuracy, tool invocation precision, and cost benchmarks.

• Ai Code Generation Guardrails

  by @sickn33

  Autonomous AI code generation safety guardrail register: static AST analysis, forbidden import filters, and zero-day vulnerability checks.

• Ai Prompt Regression Testing

  by @sickn33

  Prompt engineering regression test matrix register: baseline outputs, semantic drift thresholds, judge evaluations, and golden dataset.

• Aas Discover

  by @sickn33

  Discover AAS skills for an explicit task and compare their complete instructions without installing them.

• Aas Review Stack

  by @sickn33

  Review AAS stack manifests, preview plans and selection evidence in Workbench without applying changes.

• Ai Studio Image

  by @sickn33

  Geracao de imagens humanizadas via Google AI Studio (Gemini). Fotos realistas estilo influencer ou educacional com iluminacao natural e imperfeicoes sutis.

• Agy Delegate

  by @sickn33

  Delegate coding tasks to the Google Antigravity CLI (`agy`) only when the user explicitly requests it, while the orchestrator retains review and landing responsibility.

• Aider Delegate

  by @sickn33

  Delegate coding tasks to Aider (`aider`) only when the user explicitly requests it, while the orchestrator retains review and landing responsibility.

• Ai Coding Agent Guardrails

  by @sickn33

  Secure AI coding agents (Claude Code, Cursor, Codex, Copilot) with permission boundaries, secret protection, code review gates, and safe sandbox configurations for team environments.

• Agent Observability

  by @sickn33

  Instrument AI agents with tracing, token metrics, latency, and cost visibility. Use for reliability and debugging.

• Ai Native Cli

  by @sickn33

  Design spec with 98 rules for building CLI tools that AI agents can safely use. Covers structured JSON output, error handling, input contracts, safety guardrails, exit codes, and agent self-description.

• Agent Evals

  by @sickn33

  Build automated evaluation suites for AI agents using golden datasets, rubrics, and regression gates. Use when shipping agent features, validating prompt changes, or gating deployments on quality.

• Ai Red Teaming

  by @sickn33

  Run structured AI red team exercises for jailbreak resistance, data exfiltration risk, harmful output controls, and agent tool abuse resilience.

• Ai Loop

  by @sickn33

  Runs a bounded spec-build-review development loop with explicit scope, stop conditions, and human approval gates for risky or ambiguous work.

• Ai Agents Architect

  by @sickn33

  Expert in designing and building autonomous AI agents. Masters tool use, memory systems, planning strategies, and multi-agent orchestration.

• Ai Multilingual Dubbing

  by @sickn33

  Install and use the official Multilingual Voiceover package, pinned by digest, for paid hosted work on the Beatra service.

• Ai Podcast Voiceover

  by @sickn33

  Install and use the official AI Podcast Voiceover package, pinned by digest, for paid hosted work on the Beatra service.

• Ai Image Generation Studio

  by @sickn33

  Install and use the official AI Image Generator package, pinned by digest, for paid hosted work on the Beatra service.

• Ai Photo Restyler

  by @sickn33

  Install and use the official Photo to Anime package, pinned by digest, for paid hosted work on the Beatra service.

• Ai Logo Maker

  by @sickn33

  Install and use the official AI Logo Maker package, pinned by digest, for paid hosted work on the Beatra service.

• Ai Analyzer

  by @sickn33

  AI驱动的综合健康分析系统，整合多维度健康数据、识别异常模式、预测健康风险、提供个性化建议。支持智能问答和AI健康报告生成。

• Agents Generator

  by @sickn33

  Generate project-specific AGENTS.md and companion rules by analyzing a codebase. Supports full, minimal, update, and dry-run modes with package-manager detection, monorepos, backups, managed blocks, confidence scoring, and…

• Agent Tool Builder

  by @sickn33

  Tools are how AI agents interact with the world. A well-designed tool is the difference between an agent that works and one that hallucinates, fails silently, or costs 10x more tokens than necessary. This skill covers tool…

• Agent Qa Result Triage

  by @sickn33

  Triage failed Agent QA runs with MCP evidence, artifacts, logs, fixed failure categories, confidence, and actionable next steps.

• Accesslint Diff

  by @sickn33

  Diff a live page's accessibility violations against a baseline — by default compares uncommitted changes (stash-based), or pass --branch [<name>] to diff against a branch. Reports only new violations introduced, violations…

• Accesslint Audit

  by @sickn33

  Find and fix WCAG 2.2 accessibility issues. Two modes — report (sweep a codebase or page, produce a prioritized written report, no edits) and fix (audit→edit→verify loop on a target). Prefers direct-CDP live-DOM auditing; falls…

• Agents V2 Py

  by @sickn33

  Build container-based Foundry Agents with Azure AI Projects SDK (ImageBasedHostedAgentDefinition). Use when creating hosted agents with custom container images in Azure AI Foundry.

• 00 Andruia Consultant

  by @sickn33

  Arquitecto de Soluciones Principal y Consultor Tecnológico de Andru.ia. Diagnostica y traza la hoja de ruta óptima para proyectos de IA en español.

• Agent Qa Debug Fix

  by @sickn33

  Debug, patch, and verify failed Agent QA runs from MCP evidence, artifacts, logs, and local code without hiding product or infrastructure defects.

• Aegisops Ai

  by @sickn33

  Autonomous DevSecOps & FinOps Guardrails. Orchestrates Gemini 3 Flash to audit Linux Kernel patches, Terraform cost drifts, and K8s compliance.

• Accint Solve

  by @sickn33

  Route a goal through acc's scored-memory loop via acc_act(runtime="solve"); deliberate any returned brain_frame and submit via continue.

• Agent Memory Mcp

  by @sickn33

  A hybrid memory system that provides persistent, searchable knowledge management for AI agents (Architecture, Patterns, Decisions).

• Accint Frames

  by @sickn33

  Drain acc's deliberation queue — open/waiting brain_frames checkpointed by headless runs — via acc_act(runtime="continue").

• Agentfolio

  by @sickn33

  Skill for discovering and researching autonomous AI agents, tools, and ecosystems using the AgentFolio directory.

• Agent Manager Skill

  by @sickn33

  Manage multiple local CLI agents via tmux sessions (start/stop/monitor/assign) with cron-friendly scheduling.

• Accint Commitments

  by @sickn33

  Triage acc's open promises and close them with honest real-world verdicts via acc_act(runtime="outcome").

• Address Github Comments

  by @sickn33

  Use when you need to address review or issue comments on an open GitHub Pull Request using the gh CLI.

• Agent Framework Azure Ai Py

  by @sickn33

  Build persistent agents on Azure AI Foundry using the Microsoft Agent Framework Python SDK.

• Rex

  by @sickn33

  Translates user intent into a precise, unambiguous specification and requirements.

• Mason

  by @sickn33

  Produces clean, functional code that matches the architecture and checklists.

• Agent Squad

  by @sickn33

  Main agent orchestrator that coordinates a specialized squad of agents

• Luna

  by @sickn33

  Reviews code for objective correctness, security, and reliability.

• Max

  by @sickn33

  Cleans up and improves existing code without changing behavior.

• Jobindex Search

  by @MadsLorentzen

  Make sure to use this skill whenever the user wants to search for jobs in Denmark, find Danish job listings, look up a specific job posting, or asks anything about the Danish job market — even if they don't mention jobindex.dk…

• Freehire Search

  by @MadsLorentzen

  Use this skill to search live software / tech / data / engineering job listings across many countries and markets (and remote) via the freehire.me aggregator's public API, or to look up a specific posting. It aggregates roles…

• Exploratory Data Analysis

  by @K-Dense-AI

  Perform bounded, local exploratory analysis of explicitly supported scientific files. Use for redacted CSV/TSV/JSON profiles; optional NumPy, HDF5, FASTA/FASTQ, and basic image metadata inspection; missingness/leakage audits;…

• Ginkgo Cloud Lab

  by @K-Dense-AI

  Submit and manage protocols on Ginkgo Bioworks Cloud Lab (cloud.ginkgo.bio), a web-based interface for autonomous lab execution on Reconfigurable Automation Carts (RACs). Use when the user wants to run protein expression and…

• Hypogenic

  by @K-Dense-AI

  Plans and audits use of ChicagoHAI HypoGeniC/HypoRefine for LLM-assisted hypothesis generation from labeled text datasets. Use for the `hypogenic` package, its task configs, hypothesis banks, or HypoBench datasets—not for manual…

• Analytical Method Validation

  by @K-Dense-AI

  Plan, execute, and document validation, verification, and transfer of analytical procedures under the governing framework - ICH Q2(R2) and Q14, USP <1220>/<1225>/<1226>, ICH M10 bioanalytical, CLSI EP, or ISO/IEC 17025. Use for…

• Fluidsim

  by @K-Dense-AI

  Plan, configure, inspect, restart, and analyze bounded FluidSim computational-fluid-dynamics simulations with explicit numerical-validity and HPC safety checks. Use for FluidSim solver selection, parameter review, FFT/MPI setup,…

• Geomaster

  by @K-Dense-AI

  Comprehensive geospatial science skill covering remote sensing, GIS, spatial analysis, machine learning for earth observation, and 30+ scientific domains. Supports satellite imagery processing (Sentinel, Landsat, MODIS, SAR,…

• Gtars

  by @K-Dense-AI

  Use Gtars for local genomic interval models and set algebra, overlaps and counts, consensus and coverage, tokenization, fragment processing, and refget/BEDbase planning across Python, Rust, and the CLI.

• Geniml

  by @K-Dense-AI

  Use Geniml for audited local genomic-interval workflows: validate BED and universe contracts, plan Region2Vec or scEmbed runs, inspect model/tokenizer compatibility, and assess consensus universes.

• Geopandas

  by @K-Dense-AI

  Guidance and local audit tools for Python workflows that directly use GeoPandas GeoSeries, GeoDataFrame, spatial operations, or vector-data I/O.

• Dnanexus Integration

  by @K-Dense-AI

  Build and operate reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Use for DNAnexus data transfers, dxapp.json development, execution monitoring,…

• Genomic Coordinates

  by @K-Dense-AI

  Convert genomic intervals between coordinate conventions, normalise and compare variant representations, and detect assembly or contig-naming mismatches before they corrupt an analysis. Use whenever coordinates cross a format,…

• Datamol

  by @K-Dense-AI

  Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery including SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel…

• Get Available Resources

  by @K-Dense-AI

  Detect host inventory and effective CPU, memory, disk, scheduler, container, and accelerator limits when a user asks for resource-aware planning or before a clearly resource-sensitive local workload. Produces a redacted JSON…

• Diffdock

  by @K-Dense-AI

  DiffDock and DiffDock-L molecular docking. Use for protein-small-molecule pose prediction from PDB or sequence plus SMILES/SDF/MOL2, batch docking, virtual screening, and pose-confidence interpretation. Not for binding affinity…

• Alphagenome

  by @K-Dense-AI

  Look up precomputed AlphaGenome Atlas effects for any GRCh38 single-nucleotide variant (AVI score with Phred and 18 SHAP feature attributions, plus raw and quantile scores for RNA-seq, DNase, ATAC, ChIP-TF, ChIP-histone, CAGE,…

• Etetoolkit

  by @K-Dense-AI

  Analyze, manipulate, compare, annotate, and visualize phylogenetic or other hierarchical trees with ETE 4. Use for Newick/Nexus tree I/O, topology edits and pattern matching, Robinson-Foulds comparisons, gene-tree evolutionary…

• Bids

  by @K-Dense-AI

  Use this skill when working with Brain Imaging Data Structure (BIDS) datasets: organizing neuroscience and biomedical data (MRI, EEG, MEG, iEEG, PET, microscopy, NIRS, motion capture, EMG, MR spectroscopy, behavioral), querying…

• Biopython

  by @K-Dense-AI

  Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics…