Skills DirectorySearch all skills ↗Software Development AI agent skills
13,359 skills in the archive. Read a skill’s instructions or open its original repository.
Pride Fetch
by @ClawBio
Query metadata and download data from the PRIDE Archive, EMBL-EBI's proteomics identifications database, via the PRIDE Archive REST API v3. Works with PRIDE/ProteomeXchange accessions (PXD, PRD) to fetch project metadata, list…
Swiftlint
by @dpearson2699
Configures and enforces SwiftLint in Swift projects using build tool plugins, run scripts, and CI. Covers .swiftlint.yml configuration, disabled_rules, opt_in_rules, only_rules, analyzer_rules, baselines, autocorrect,…
Ios Networking
by @dpearson2699
Build, review, or improve networking code in iOS/macOS apps using URLSession with async/await, structured concurrency, and modern Swift patterns. Use when working with REST APIs, downloading files, uploading data, WebSocket…
Swiftui Performance
by @dpearson2699
Profile, diagnose, and remediate SwiftUI runtime performance using code review, Instruments, and repeatable measurements. Use when a SwiftUI screen renders slowly, scrolling or animations hitch, view bodies update excessively,…
Swiftui Webkit
by @dpearson2699
Embeds and controls web content in SwiftUI with WebKit for SwiftUI, including WebView, WebPage, navigation policies, JavaScript execution, observable page state, link interception, local HTML or data loading, and custom URL…
Biostudies Fetch
by @ClawBio
Query metadata and download data from EMBL-EBI BioStudies, the database that describes biological studies and links their data across collections (ArrayExpress, BioImages, BioModels, EGA-linked studies and standalone…
Focus Engine
by @dpearson2699
Implements keyboard, directional, and scene-level focus behavior across SwiftUI and UIKit. Use when managing @FocusState, defaultFocus, focused values, focusable interactions, focus sections, tvOS geometric focus and Siri Remote…
Ios Memgraph Analysis
by @dpearson2699
Use when capturing or analyzing an iOS .memgraph, especially when the task mentions a memory leak, heap growth, persistent memory increase, ownership path, or matched-capture comparison with Apple CLI tools. Covers unambiguous…
Push Notifications
by @dpearson2699
Implement, review, or debug push notifications in iOS/macOS apps — local notifications, remote (APNs) notifications, rich notifications, notification actions, silent pushes, and notification service/content extensions. Use when…
App Store Review
by @dpearson2699
Audits App Store submission readiness and rejection risk across current review guidelines, PrivacyInfo.xcprivacy and required-reason APIs, privacy labels, ATT, StoreKit payments, metadata, entitlements, widgets, and Live…
Ios Ettrace Performance
by @dpearson2699
Use when capturing or analyzing ETTrace profiles for a focused iOS launch or runtime flow, including exact-build dSYM UUID matching, Simulator or device capture, processed per-thread flamegraph JSON, sampled inclusive/exclusive…
Dangerous Animals Of Pm Generator
by @deanpeters
Generate creature acronyms that name PM dysfunctions, blockers, or winning strategies. Use when you want to give your team shared vocabulary for the animals hiding in your product work.
Background Processing
by @dpearson2699
Schedule and execute background work on iOS using BGTaskScheduler. Use when registering BGAppRefreshTask for short background fetches, BGProcessingTask for long-running maintenance, BGContinuedProcessingTask (iOS 26+) for…
Browserenginekit
by @dpearson2699
Build alternative browser engines using BrowserEngineKit. Use when developing a non-WebKit browser engine for iOS/iPadOS in supported regions, managing web content/rendering/networking extension processes, configuring GPU and…
Adattributionkit
by @dpearson2699
Measure ad effectiveness with privacy-preserving attribution using AdAttributionKit. Use when registering ad impressions, handling attribution postbacks, updating conversion values, implementing re-engagement attribution,…
Permissionkit
by @dpearson2699
Create child communication safety experiences using PermissionKit to request parental permission for children. Use when building apps that involve child-to-contact communication, need to check communication limits, request…
Metrickit
by @dpearson2699
Use when collecting or analyzing production iOS or iPadOS performance telemetry with MetricKit, including iOS 27 MetricManager async metric or diagnostic reports, hang or crash triage, custom signposts, extended launch…
Autoresearch
by @OpenLAIR
Autonomous Goal-directed Iteration. Apply Karpathy's autoresearch principles to ANY task. Loops autonomously — modify, verify, keep/discard, repeat. 9 subcommands: plan, debug, fix, security, ship, scenario, predict, learn.
Ds Baseline
by @OpenLAIR
Use when a quest needs to attach, import, reproduce, repair, verify, compare, or publish a baseline and its metrics.
Ds Rebuttal
by @OpenLAIR
Use when a quest already has a paper, draft, or review package and the task is to map reviewer feedback into experiments, manuscript deltas, and a durable rebuttal / revision response.
Ds Scout
by @OpenLAIR
Use when a quest needs problem framing, literature scouting, dataset or metric clarification, or baseline discovery before deeper work.
Ds Experiment
by @OpenLAIR
Use when a quest is ready for a concrete implementation pass or a main experiment run tied to a selected idea and an accepted baseline.
Dr Claw
by @OpenLAIR
Dr. Claw skill for OpenClaw project discovery, idea intake, waiting-session triage, structured session control, event-driven notifications, and mobile reporting through the local drclaw CLI.
Ds Decision
by @OpenLAIR
Use when the quest needs an explicit go, stop, branch, reuse-baseline, write, finalize, reset, or user-decision transition with reasons and evidence.
Ds Intake Audit
by @OpenLAIR
Use when a quest does not start from a blank state and the agent must first audit, trust-rank, and reconcile existing baselines, results, drafts, or review materials before choosing the next anchor.
Ds Figure Polish
by @OpenLAIR
Use when a quest needs a polished milestone chart, paper-facing figure, appendix figure, or a mandatory render-inspect-revise pass before treating a figure as final.
Redo
by @udecode
Redo a prior pstack run at the current session's higher effort or stronger model, treating its plan as a draft: rerun only the plan, design, subagent and seat lanes, code and review judgments that ran below the current level,…
Aris Compute Guard
by @OpenLAIR
Mandatory pre-flight compute resource check before running experiments. Detects whether local/remote GPU or compute resources are actually available. If resources are unavailable, STOPS the experiment pipeline immediately and…
Aris Dse Loop
by @OpenLAIR
Autonomous design space exploration loop for computer architecture and EDA. Runs a program, analyzes results, tunes parameters, and iterates until objective is met or timeout. Use when user says "DSE", "design space…
Aris Serverless Modal
by @OpenLAIR
Run GPU workloads on Modal — training, fine-tuning, inference, batch processing. Zero-config serverless: no SSH, no Docker, auto scale-to-zero. Use when user says "modal run", "modal training", "modal inference", "deploy to…
Aris Experiment Bridge
by @OpenLAIR
Workflow 1.5: Bridge between idea discovery and auto review. Reads EXPERIMENT_PLAN.md, implements experiment code, deploys to GPU, collects initial results. Use when user says "实现实验", "implement experiments", "bridge",…
Aris System Profile
by @OpenLAIR
Profile a target (script, process, GPU, memory, interconnect) using external tools and code instrumentation. Produces structured performance reports with actionable recommendations. Use when user says "profile", "benchmark",…
Aris Training Check
by @OpenLAIR
Periodically check WandB metrics during training to catch problems early (NaN, loss divergence, idle GPUs). Avoids wasting GPU hours on broken runs. Use when training is running and you want automated health checks.
Aris Run Experiment
by @OpenLAIR
Deploy and run ML experiments on local, remote, Vast.ai, or Modal serverless GPU. Use when user says "run experiment", "deploy to server", "跑实验", or needs to launch training jobs.
Ds Optimize
by @OpenLAIR
Use when an algorithm-first quest should manage candidate briefs, optimization frontier, branch promotion, or fusion-aware search instead of the paper-oriented default loop.
Aris Vast Gpu
by @OpenLAIR
Rent, manage, and destroy GPU instances on vast.ai. Use when user says "rent gpu", "vast.ai", "rent a server", "cloud gpu", or needs on-demand GPU without owning hardware.
Ds Full Pipeline
by @OpenLAIR
Full DeepScientist research pipeline: scout → baseline → idea → experiment → analysis → optimize → write → review → finalize. End-to-end autonomous research lifecycle.
Deep Research
by @199-biotechnologies
Use when the user needs multi-source research with citation tracking, evidence persistence, and structured report generation. Triggers on "deep research", "comprehensive analysis", "research report", "compare X vs Y", "analyze…
Zard
by @zard-ui
Manages zard/ui components and projects — adding, composing, styling, and debugging Angular UI built on TailwindCSS v4. Provides project context, component source, and the real API instead of a remembered one. Applies when…
Deeppapernote
by @917Dhj
Generate a high-quality deep-reading note for a single paper and write it into an Obsidian-style vault. Use when the user gives a paper title, DOI, URL, arXiv ID, Zotero item, or local PDF and wants a polished Markdown note with…
Pdf
by @platonai
Extracts text and tables from PDF files, fills PDF forms, and creates/merges/splits PDF documents. Use when users mention PDFs, forms, document extraction, or PDF generation.
Mcp Builder
by @platonai
Guide for creating advanced-quality MCP (Model Context Protocol) servers that enable LLMs to interact with external services through well-designed tools. Use when building MCP servers to integrate external APIs or services,…
Web Scraping
by @platonai
Extracts data from web pages using browser automation and CSS/JavaScript selectors. Use when you need to scrape titles/text/structured fields from live web pages or when the user mentions scraping, extraction, or selectors.
Data Validation
by @platonai
Validates data against common and custom rules (required fields, formats, ranges). Use when checking data quality, input validation, or enforcing schemas and constraints.
Weather
by @platonai
Fetches current weather conditions and a 7-day forecast for a requested location using Open-Meteo geocoding and forecast APIs. Use when the user asks about weather, temperature, rain, wind, or a weekly forecast for a place.
Task Token Usage
by @platonai
Analyzes Claude Code session traces (JSONL) and draft task files to report token usage per task. Use when asked about token usage, session costs, or task efficiency metrics.
Organize Task Files
by @platonai
Lists, pairs, deduplicates, and moves task files across the Coworker task state machine (0draft → 6git-pushed). Use when asked to organize, clean up, or audit task files.
Script Runner
by @platonai
A tiny test skill that runs a safe python script and echoes argv. Use to validate the skill script execution pipeline (allowed-tools gating, timeout, and output limits).
Browser4 Coding
by @platonai
Create and validate Browser4 plugins, skills, JS scripts, and shell scripts; and develop Browser4 ITSELF (self-development): build modules, extract live skeletons, analyze impact, plan dev tasks, and check CDP pitfalls. Use when…
Browser4 Dev
by @platonai
Develop features inside the Browser4 repository itself: add CLI commands, agent tool domains, REST endpoints, tests, and skills; analyze impact, plan dev tasks, check CDP pitfalls, and verify builds. Use when the user asks to…
Coworker
by @platonai
Reference for the Coworker file-queue automation system: task lifecycle, directory state machine, PowerShell workers, scheduler configuration, and operational conventions. Use when you need to understand how Coworker works or…
Browser4 Experience
by @platonai
Use experience_save to persist task traces, experience_query to recall them on revisit, and experience_list to inspect stored knowledge. Reuses selectors, extraction patterns, and blocker awareness across sessions.
Maintenance
by @platonai
Orchestrates 30 check scripts across 9 categories (code, tests, docs, SKILLs, deps, infra). Use when asked to run maintenance, check quality, verify docs, audit SKILLs, or clean up artifacts.
Galaxy Bridge
by @ClawBio
Galaxy tool discovery, intelligent recommendation, and execution — 8,000+ bioinformatics tools from usegalaxy.org with multi-signal scoring and workflow suggestions
Nfcore Scrnaseq Wrapper
by @ClawBio
Wrapper skill for running nf-core/scrnaseq 4.1.0 upstream single-cell RNA-seq preprocessing from FASTQ with strict preflight, reproducibility outputs, and downstream handoff to ClawBio scRNA skills.
Nfcore Rnaseq Wrapper
by @ClawBio
Wrapper skill for running nf-core/rnaseq bulk RNA-seq preprocessing from FASTQ or BAM inputs with strict preflight, reproducibility outputs, and downstream handoff to ClawBio bulk RNA-seq DE skills.
Pharmgx Reporter
by @ClawBio
Pharmacogenomic report from DTC genetic data (23andMe/AncestryDNA) — 12 genes, 31 SNPs, 51 drugs
Matlab Use Scenario Builder
by @matlab
Generate driving scenes, scenarios, road surfaces, and 3D content from scenariobuilder.* sensor data (GPS, camera, lidar, actor tracks) using Scenario Builder for Automated Driving Toolbox. BUILD, EXPORT, or AUGMENT a virtual…
Matlab Deploy Embedded Ai
by @matlab
Deploy AI models to embedded hardware using MathWorks tools (MATLAB, Simulink, Embedded Coder). Covers two workflow patterns: (1) MathWorks-native or imported models rebuilt as dlnetwork for lean hardware, (2) direct C/C++ code…
Matlab Use Machine Learning Apps
by @matlab
Use when the user wants to train, compare, or export machine learning models using Classification Learner or Regression Learner — including opening the app, loading data, training models, evaluating metrics, comparing results,…
Matlab Package Toolbox
by @matlab
Turn raw MATLAB code into a published .mltbx toolbox — full pipeline from scope definition through packaging and release. Drives 8 phases with human checkpoints, enforcing ordering and dependencies. Use when asked to package,…
Polars Bio
by @ClawBio
Fast genomic interval operations (overlap, nearest, merge, coverage, cluster, complement, subtract, count-overlaps), multi-format bioinformatics I/O, DataFusion SQL, and pileup on Polars DataFrames via polars-bio. A scalable…
Gwas Lookup
by @ClawBio
Federated variant lookup across 8 genomic databases — GWAS Catalog, Open Targets, PheWeb (UKB, FinnGen, BBJ), GTEx, and more.
Nutrigx
by @ClawBio
Personalised nutrition report from consumer genetic data (23andMe, AncestryDNA, VCF) — interrogates nutritionally-relevant SNPs and generates actionable dietary guidance, all computed locally.
Roadrunner Rrhd Authoring
by @matlab
Build RoadRunner HD Map entities in MATLAB — lanes, boundaries, markings, junctions, signs, signals, barriers, parking. Use when creating driving scenes from scratch, authoring road networks for simulation and testing automated…
Dnasp
by @ClawBio
Population genetics of pre-aligned DNA sequences or multi-sample VCFs using selected DnaSP 6 methods. Use for diversity, neutrality statistics, linkage disequilibrium, InDel polymorphism, divergence, MK, Ka/Ks and codon usage;…
Drug Photo
by @ClawBio
Medication photo to personalised PGx dosage card via Claude vision — snap a pill, get genotype-informed guidance
Data Extractor
by @ClawBio
Extract numerical data from scientific figure images using Claude vision + OpenCV calibration. Supports 26+ plot types including bar charts, scatter plots, forest plots, Kaplan-Meier curves, box plots, and more.
Matlab Modernize Code
by @matlab
Modernize removed or discouraged MATLAB functions and patterns. Use when the check_matlab_code MCP tool reports that a function "is not recommended", "will be removed in a future release", or "has been removed" — at any severity…
Matlab Simulate Radar Detections
by @matlab
Configure, simulate, debug, and analyze radarDataGenerator within radarScenario. Use for: interactively building radar detection scenarios from datasheets or performance requirements; diagnosing missed detections and…
Matlab Use Experiment Manager
by @matlab
Create, modify, or delete experiments in Experiment Manager with live UI sync. TRIGGER when: user asks to create an experiment from code/script, wants to sweep parameters, asks to add/delete/edit experiments, or wants parameter…
Rare High Impact Variants
by @ClawBio
Count rare, high-impact loss-of-function variants carried in a VCF, annotated with molecular consequence and population allele frequency
Matlab Integrate Pytorch Vision
by @matlab
Creates MATLAB interfaces to Python image processing and computer vision models from GitHub repositories or pip-installable packages using MPyReq. Use when asked to interface MATLAB with a Python CV/image model (segmentation,…
Fine Mapping
by @ClawBio
Statistical fine-mapping of GWAS loci using SuSiE, SuSiE-inf, and Approximate Bayes Factors to identify credible sets and posterior inclusion probabilities (PIPs) for causal variant discovery. SuSiE-inf adds an infinitesimal…
Gwas Pipeline
by @ClawBio
End-to-end GWAS automation wrapping PLINK2 for genotype QC and REGENIE for two-step whole-genome regression association testing. Produces Manhattan plots, QQ plots, clumped lead variants, and structured summary statistics.
Matlab Use Visual Inspection
by @matlab
Build machine vision inspection systems with MATLAB Visual Inspection Toolbox. Covers the full arc from problem selection through deployment: anomaly detection (Student-Teacher, PatchCore, FastFlow, FCDD), object detection…
Matlab Solve Optimization
by @matlab
Use when writing, solving, or debugging MATLAB optimization code — formulating problems (optimproblem, optimvar, fcn2optimexpr), selecting and configuring solvers (fmincon, linprog, quadprog, intlinprog, lsqnonlin, ga,…
Genome Compare
by @ClawBio
Compare your genome to George Church (PGP-1) and estimate ancestry composition via IBS and EM admixture
Matlab Use Database
by @matlab
Reads from, writes to, and manages relational databases using MATLAB Database Toolbox. Use when connecting to databases, reading data with sqlread or fetch, filtering with rowfilter, writing with sqlwrite, updating with…
Matlab Read Documentation
by @matlab
Guides the agent to reference official MathWorks Documentation and Help. Determine correct function syntax and workflows from user guides when deeper context is needed. Minimize iterations and repetitive trial and error. Use…
Wgs Prs
by @ClawBio
End-to-end WGS to polygenic risk score pipeline. Takes paired-end FASTQ files (or a pre-existing VCF) through nf-core/sarek for variant calling, applies VCF QC (normalisation, hard filtering, Ti/Tv and Het/Hom checks), then…
Matlab Identify Linear System
by @matlab
Identify a linear dynamic model from input-output or time-series data using MATLAB System Identification Toolbox. Use when estimating transfer function, state-space, ARX, ARMAX, BJ, OE polynomial or process models from…
Matlab Design Radar
by @matlab
Launch and control the MATLAB Radar Designer app programmatically via MCP. Use when designing radar systems, configuring parameters, comparing radar types, analyzing performance metrics, or managing radar design sessions.
Diff Visualizer
by @ClawBio
Rich downstream visualisation and reporting for bulk RNA-seq differential expression and scRNA marker/contrast outputs.
Proteomics Clock
by @ClawBio
Compute organ-specific biological age from Olink proteomic data using Goeminne et al. (2025) elastic net aging clocks.
Archaic Introgression
by @ClawBio
Detect Neanderthal and Denisovan introgression segments from modern human genomes
Affinity Proteomics
by @ClawBio
Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, RFU). Platform-aware QC, normalisation, differential abundance, volcano plots, heatmaps, and PCA.
Proteomics De
by @ClawBio
Differential expression analysis for label-free quantitative (LFQ) intensity data with standard MaxQuant and DIA-NN output. Workflow includes preprocessing, imputation, and statistical testing.
Just Prs Mcp
by @ClawBio
Compute evidence-aware polygenic risk scores from a local VCF or WGS file through the validated just-prs engine and a pinned local just-prs MCP server.
Profile Report
by @ClawBio
Unified personal genomic profile report — reads a PatientProfile JSON and synthesizes all skill results into a single "Your Genomic Profile" document.
Target Validation Scorer
by @ClawBio
Evidence-grounded target validation scoring with GO/NO-GO decisions for drug discovery campaigns
Matlab Validate Function Arguments
by @matlab
Use when writing MATLAB functions with arguments blocks — repeating arguments (arguments (Repeating)), .?ClassName property import in constructors, name-value forwarding with namedargs2cell, or migrating from inputParser or…
Matlab Access Datafeed
by @matlab
Guide for accessing financial and economic data in MATLAB using the Datafeed Toolbox. Covers Bloomberg (market data via bloomberg/blp/bloombergHypermedia), FRED (Federal Reserve economic data via fredrs), Haver Analytics…
Gi Expression
by @ClawBio
Predict tissue / cell-type expression (log TPM + TPM) from a 9,198–500,000 bp TSS-centered DNA sequence (longer than one 9,198 bp window needs --tss-index) using the Genomic Intelligence G0 Expression model, via the hosted…
Gi Annotation
by @ClawBio
Predict gene and transcript structure (intervals, exons, strand) from a DNA sequence using the Genomic Intelligence DNA Annotation model, via the hosted /v1/tasks/annotation/predict API. Submitted asynchronously — the pipeline…
Analyze Fasta
by @ClawBio
Analyze a single FASTA file (nucleotide or protein), compute sequence-level metrics (GC, ORFs, MW, pI, GRAVY, secondary-structure fractions) with Biopython, and write a Markdown report plus structured JSON for downstream chaining.
Gi Promoter
by @ClawBio
Detect promoter regions in DNA sequences using the Genomic Intelligence G0 transformer (GENA-LM BERT Large), via the hosted /v1/tasks/promoter/predict API. Returns per-window promoter probabilities and called regions.
Gi Splice
by @ClawBio
Detect splice donor and acceptor sites in DNA sequences using the Genomic Intelligence G0 BigBird transformer, via the hosted /v1/tasks/splice/predict API. Returns per-position site probabilities and called sites.
Gi Chromatin
by @ClawBio
Predict chromatin state — histone marks, DNase, TF binding — across 919 tracks (DeepSEA-style) for DNA sequences, via the hosted Genomic Intelligence /v1/tasks/chromatin/predict API.
Labstep
by @ClawBio
Query and display Labstep electronic lab notebook data — experiments, protocols, resources, and inventory — via labstepPy. Supports offline demo mode with synthetic biology data.